Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015822390.1_cds_XP_016501108.1_14875
CDS Infomation

[gene=LOC107819511] [db_xref=GeneID:107819511] [protein=2-oxoisovalerate dehydrogenase subunit alpha 1, mitochondrial-like] [protein_id=XP_016501108.1] [location=complement(join(22002..22169,22251..22436,22534..22673,22903..23014,23120..23219,23297..23454,24044..24226,24409..24546,35962..36186))] [gbkey=CDS]
Sequence

ATGGCAAGTTGGGTTGTAAGATCAAGAAGCTGCTTAAATCATTTTCTACCAAGCTCAAGG
AGGACTAGCTGCAGTGGCATTATAAGAAAGCTGCCGGTGGCTTTTTCCGGCGAGTCTGCC
GCCGTTCTTGTATCAAGACGTTTCGAGTCCATTGAAGCTGGACAGAAACTGGATCCATGC
AGTTATGAAGAGGATTATCATAATGACACTGCTCACGAAAATCAGGCTTTGGATTTTCCA
GGTGGGAAAATTCCATTAACATCACAAATGAAGTTTATTTCAGAGGCATCCGATATGAGG
TTGCCATGTTATCGAGTTCTAAATGATGATGGCTCTCTAATTTCCGATAGCATATATGAG
CAGGTAGGGGAAGAACTAGCTGTGAACATGTACACTGCCATGGTTACTCTTAAGACTATG
GACACATTCCTTTATGAAGCACAAAGGCAAGGCAGAATTTCCTTCTATATGACATCTTGT
GGTGAAGAAGCCATCAACATTGCATCTGCTGCTGCTCTATCTCCACATGACTTTGCATTA
CCTCAATATAGAGAAGCAGGGGTCTTGCTATGGCGTGGCTTTACCGTGCAAGAATGCACC
AACCAATGTTTTGGGAATAAGGATGATAAAGGAAAAGGCAGACAAATGCCAGTACATTAT
GGTTCCAAGAAACACAATGTTATTACCATCTCTTCACCTTTGGCCACTCAGATATCTCAG
GCTGCTGGTGTGGCTTATTCTCTAAAACTGGATAAAAGGGGCACATGTGCTGTTGTTTAT
ACAGGGGATGGTGGAACCAGTGAGGGAGATTTTCATGCTGGATTGAACTTTGCAGCAGTT
ATGGAAGCTCCTGTTATCTTCATATGCCGGAATAATGGATGGGCCATAAGCACCCCTGTA
AATGAACAGTTCCGAAGTGATGGCATTGTGACAAAGGGACTAGGTTATGGAATAAGAAGT
ATTCGAGTAGATGGAAATGATGCTATTGCTGTTTATAGTGCTATTCATGCAGCTCGGAAT
ATGGCAATCAATGAGGATAGACCAATATTAGTTGAGGCAATGACTTATCGAGTGGGACAC
CATTCAACATCTGATGATTCTACAAGGTATCGGGCAACAAATGAAATAGAATACTGGAAA
ACAGTCAGAAGCCCCATTGCCAGATTCAGAAAATGGATTCAGAGAAATGGTTGGTGGAGT
GATGACAAGGAATCTGAATTCTGCAGAAATACCAAGAAACAGGTACTGCAGGCAATTCAA
ACAGCAGAGAAAATGGAAAAACCTCCATTGACAGAATTGTTTACAGATGTATATGACCAG
ATGCTACCTAACCTCCAAGAGCAAGAGAGGTCTCTTAGAGACGCATTCAAGAAACACTCA
ACAGACTACCCAACTGATGTCCATGTATAG

Peptide Sequence

PEP ID

XP_016501108.1
PEP Infomation

PREDICTED: 2-oxoisovalerate dehydrogenase subunit alpha 1, mitochondrial-like [Nicotiana tabacum]
Sequence

MASWVVRSRSCLNHFLPSSRRTSCSGIIRKLPVAFSGESAAVLVSRRFESIEAGQKLDPC
SYEEDYHNDTAHENQALDFPGGKIPLTSQMKFISEASDMRLPCYRVLNDDGSLISDSIYE
QVGEELAVNMYTAMVTLKTMDTFLYEAQRQGRISFYMTSCGEEAINIASAAALSPHDFAL
PQYREAGVLLWRGFTVQECTNQCFGNKDDKGKGRQMPVHYGSKKHNVITISSPLATQISQ
AAGVAYSLKLDKRGTCAVVYTGDGGTSEGDFHAGLNFAAVMEAPVIFICRNNGWAISTPV
NEQFRSDGIVTKGLGYGIRSIRVDGNDAIAVYSAIHAARNMAINEDRPILVEAMTYRVGH
HSTSDDSTRYRATNEIEYWKTVRSPIARFRKWIQRNGWWSDDKESEFCRNTKKQVLQAIQ
TAEKMEKPPLTELFTDVYDQMLPNLQEQERSLRDAFKKHSTDYPTDVHV

Transcript Sequence

Gene sequence data has not been registered.